Health
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Novel deep learning-based software detects and tracks individual cells with high precision
Assistant Professor of Biomolecular Engineering Ali Shariati and doctoral student Abolfazl Zarageri together with several student researchers in the Shariati lab have developed and released a new deep learning model called “DeepSea,” one of the only tools with the ability to segment cells, track them and detect their division to follow lineages of cells.
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Karen Miga named 2023 Searle Scholar to study uncharted regions of the human genome
Karen Miga, assistant professor of biomolecular engineering at UC Santa Cruz, has been named a 2023 Searle Scholar.
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Human pangenome reference will enable more complete and equitable understanding of genomic diversity
UC Santa Cruz scientists, along with a consortium of researchers, have released a draft of the first human pangenome—a new, usable reference for genomics that combines the genetic information of 47 individuals from different ancestral backgrounds to allow for a deeper, more accurate understanding of worldwide genomic diversity.
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UC Santa Cruz to lead data collection center for major federal project on genetic underpinnings of neurological conditions
The UC Santa Cruz Genomics Institute will run the Data Coordination Center for the Scalable and Systematic Neurobiology of Psychiatric and Neurodevelopmental Disorder Risk Genes (SSPsyGene) Consortium.
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Naming system for transfer RNA fragments will increase research productivity, standardization
UC Santa Cruz Professor of Biomolecular Engineering Todd Lowe and his group created a new naming scheme for tRNA fragments aimed at standardizing research.
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Two major stem cell research projects supported with more than $2.6 million in funding
The California Institute for Regenerative Medicine (CIRM) will provide more than $2.6 million in total funding for two major stem cell research projects led by scientists at UC Santa Cruz, the organization announced.
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Study presents vision of machine learning leveraged for precision medicine
In a new perspective published in the journal Cell Reports Physical Science, Associate Professor of Applied Mathematics Marcella Gomez details a vision for how the field can move beyond static data to create systems that measure and monitor the real-time responses of the body to a variety of factors and use a machine learning algorithm…
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Electrical engineer will develop next-generation x-ray technology for accessible preventative healthcare
Associate Professor of Electrical and Computer Engineering Shiva Abbaszadeh will develop advanced x-ray technology for coronary artery calcification.
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Biomolecular engineering professor wins American Cancer Society award to develop technology for cancer early detection
Assistant Professor of Biomolecular Engineering Daniel Kim won a four-year, $792,000 Research Scholar award from the American Cancer Society to support his work in developing RNA liquid biopsy technology to diagnose cancer early on.
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From concept to commercialization: how UCSC researchers revolutionized DNA sequencing
More than a quarter century since the first patents were filed, the UCSC researchers who pioneered nanopore sequencing reflect on the impact of their invention
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New study shows COVID-19 genomic recombination is uncommon but disproportionately occurs in spike protein region
An analysis of millions of SARS-CoV-2 genomes finds that recombination of the virus is uncommon, but when it occurs, it is most often in the spike protein region, the area which allows the virus to attach to and infect host cells.
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Hallmark cancer gene regulates RNA ‘dark matter’
A new study finds that a key genetic mutation that occurs early on in cancer alters RNA “dark matter” and causes the release of previously unknown RNA biomarkers for cancer early detection.