bpaten
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It’s a colorful pangenome world
A pangenome can reveal the spectrum of genome variation within a species. The toolbox for working with pangenomes is filling up.
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UC Santa Cruz is the top public research university in the world for highly cited researchers amid strong 2025 list
25 UC Santa Cruz researchers earned a spot on the prestigious annual list.
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AI Model Digs Up Rare Somatic Variants for Precision Oncology Pipelines
Professor of Biomolecular Engineering Benedict Paten spoke about new methods developed to find elusive DNA mutations that occur only in tumor cells.
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New AnVIL Data Explorer makes valuable datasets more accessible for health research
The web-based tool allows scientists to make the most of past research investments by making it easy to find and use already-collected genomic datasets and is expected to accelerate discovery for conditions like cancer, rare disease, and Alzheimer’s.
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Long read sequencing reveals more genetic information while cutting time and cost of rare disease diagnoses
A new study shows that long-read sequencing has the potential to improve the rate of diagnosis while reducing the time to diagnosis from years to days — in a single test and at a much lower cost.
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2023 list of most highly cited researchers includes 18 UC Santa Cruz scientists and engineers
In a notable recognition of scholarly achievement, 18 scientists and engineers from UC Santa Cruz have earned a spot on the 2023 Highly Cited Researchers list, recently unveiled by Clarivate.
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Human pangenome reference will enable more complete and equitable understanding of genomic diversity
UC Santa Cruz scientists, along with a consortium of researchers, have released a draft of the first human pangenome—a new, usable reference for genomics that combines the genetic information of 47 individuals from different ancestral backgrounds to allow for a deeper, more accurate understanding of worldwide genomic diversity.
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UC Santa Cruz to lead data collection center for major federal project on genetic underpinnings of neurological conditions
The UC Santa Cruz Genomics Institute will run the Data Coordination Center for the Scalable and Systematic Neurobiology of Psychiatric and Neurodevelopmental Disorder Risk Genes (SSPsyGene) Consortium.
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Genome of famed sled dog Balto reveals genetic adaptations of working dogs
Still a good boy nearly 100 years after historic sled run, Balto has now helped scientists explore the genetics of working dogs and demonstrate the power of comparative genomics.
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Researchers produce first-ever toolkit for RNA sequencing analysis using a ‘pantranscriptome’
Researchers at UC Santa Cruz introduce the first-ever method for analyzing RNA sequencing data genome-wide using a “pantranscriptome.”
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List of most highly cited researchers features 19 UCSC scientists and engineers
A new list of the world’s most highly cited researchers includes 19 scientists and engineers at UC Santa Cruz.
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UCSC and Amazon Web Services work to accelerate genomics research
The UC Santa Cruz Genomics Institute is collaborating with Amazon Web Services (AWS) to allow researchers to quickly and efficiently execute bioinformatics pipelines on AWS’s global cloud infrastructure.